Delve Detect mNGS, CSF (Sendout)

General Information

Lab Name
Delve Detect mNGS, CSF (Sendout)
Lab Code
RCMNGS
Epic Name

Order using Lab Undefined [LABUND]

External Test Id
DN01
Description

Useful For: Aiding in the detection of RNA and DNA from viruses, bacteria, parasites and fungi associated with meningitis and encephalitis.

Ordering Requirements: Indications for this test are rare. Microbiology/Virology faculty approval is required. To initiate the approval process, contact the Laboratory Medicine Resident (LMR) via the paging operator at (206) 598-6190.

References
Synonyms
deep sequencing, Delve Detect CSF, DN01, Metagenome sequencing, Metagenomic next-generation sequencing, mNGS pathogen detection, P710
Components

Interpretation

Guidelines
Method

Pathogen agnostic, metagenomic next generation sequencing with bioinformatic analysis and interpretive report.

Reference Range
See individual components
Ref. Range Notes

Reference Range:

DNA Viruses: Not Detected
RNA Viruses: Not Detected
Bacteria: Not Detected
Fungi: Not Detected
Parasites: Not Detected
References

Ordering & Collection

Specimen Type
CSF
Collection

1 mL CSF collected in a sterile collection container

  • CSF to be transferred under sterile conditions by the Microbiology or Molecular Microbiology lab to a dedicated Delve Bio tube with stabilization buffer.
Approval Required
Microbiology/Virology Faculty approval required.
Handling Instructions

Outside Laboratories: Due to special collection requirements, clients should arrange for testing directly with Delve Bio.

Quantity
Requested: 1 mL CSF transferred to a Delve Bio sample tube
Minimum: 0.5 mL CSF transferred to a Delve Bio sample tube

Processing

Receiving Instructions

PSPS: Samples must be aliquoted using aseptic technique. Transport the original CSF container and a new Delve Bio kit to Microbiology laboratory for assistance with sample transfer. If samples are unable to be processed immediately, refrigerate the unopened CSF sample.

Microbiology/Molecular Microbiology Lab:

  • A Delve Bio kit is required. Kits are available in PSPS Sendouts.
  • Using the materials provided in the kit, transfer 1 mL CSF to the Delve Bio sample tube under sterile conditions (refer to full instructions linked below).
  • 1mL of CSF is recommended; if less than 1mL is available for transfer, contact Delve at (844) 221-7423 for further instruction.
  • Ensure that the Sunquest label does not cover the expiration date on the Delve tube.
  • Once samples have been transferred, return the sample and kit to the Sendouts bench. Once transferred to the Delve Tube, store samples at ambient temperature.
  • If unable to transfer samples within 6 hours, unopened CSF may be stored refrigerated for up to 7 days (or up to 90 days at -20°C).

Sendouts:

  • Delve Bio Test: Delve Detect CSF (DN01)
  • CSF must be transferred to a Delve Bio sample tube or the order will be rejected.
  • Contact CAST for assistance with online ordering. Delve Detect orders are considered urgent and should be expedited as much as possible.
    • CAST requires the Delve Tube ID (DNT#####) and Manifest ID (DM#####) to place the order. This information is found on the bottom of the barcode label included in the kit.
  • Once the order has been placed, CAST will provide an electronic requisition to be be sent with the sample.
  • Package sample and TRF in the provided kit. Send only one sample per kit.
  • Ship samples Monday through Friday using the provided Delve Bio kit.
  • Notify CAST of an outgoing order via Teams, phone, or HC1 Task. Results should be expedited.

Stability (once transferred to the Delve Bio Sample tube): Ambient (preferred): 1 month; Refrigerated: 2 months; Frozen (-20°C): 90 days.

Stability (Prior to Transfer to Delve Bio Sample Tube): Refrigerated: 7 days; Frozen (-20°C): 90 days; Ambient: 6 hours. No more than 2 freeze/thaw cycles.

Reject Due To: Gross hemolysis (>200mg/dl), insufficient volume (<0.5mL), sample not in Delve Tube, leaking sample.

Sample Transfer Kits are provided by Delve Bio: Call (844) 221-7423 or email: support@delve.bio.

Misc Sendout

Performance

Lab Department
Sendouts(SO)
Frequency
Performed: Monday through Saturday. Report Available: 2 business days from sample receipt at Delve Bio.
Available STAT?
No
Performing Location(s)
Sendout Delve Bio, Broad Clinical Laboratories, LLC
844-221-7423

27 Blue Sky Drive
Burlington, MA 01803

Fax: 833-556-5216

Billing & Coding

CPT Codes
81479